DATF - The Database of Arabidopsis Transcription Factor
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  • MYB Family Introduction
  • MYB Family Strucutre Information
  • Binding Site of This Family
  • Download Sequences of This Family
          Genomic sequence       cds sequence       protein sequence
  • Multi-alignment and Phylogenetic Tree for DNA binding domain   
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  • List of MYB family(Total: 150 Loci; 165 Gene Models):

    Page: 1 2 3 4 5 list all   (30 Loci a page)
    LocusGene ModelsDescription
    AT1G06180AT1G06180.1 Symbol: ATMYB13 | myb family transcription factor, identical to GB:CAA90748 GI:1263093 from (Arabidopsis thaliana);contains PFAM profile:PF00249 | chr1:1889407-1891157 FORWARD | Aliases: F9P14.4, F9P14_4
    AT1G08810AT1G08810.1 Symbol: MYB60 | myb family transcription factor (MYB60) | chr1:2819068-2820398 REVERSE | Aliases: F22O13.30, F22O13_30, MYB60
    AT1G09540AT1G09540.1 Symbol: MYB61 | myb family transcription factor (MYB61), contains PFAM profile: myb DNA-binding domain PF00249 | chr1:3086163-3087914 FORWARD | Aliases: ATMYB61, F14J9.20, F14J9_20
    AT1G09770AT1G09770.1 Symbol: ATCDC5 | myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:3161843-3165362 FORWARD | Aliases: ATCDC5, CDC5, F21M12.15, F21M12_15
    AT1G14350AT1G14350.1 Symbol: MYB124 | myb family transcription factor (MYB124), contains PFAM profile: PF00249 myb-like DNA binding domain | chr1:4908250-4911163 FORWARD | Aliases: F14L17.12, F14L17_12
    AT1G16490AT1G16490.1 Symbol: None | myb family transcription factor (MYB58), contains PFAM profile: myb DNA binding domain PF00249 | chr1:5629648-5630988 REVERSE | Aliases: F3O9.29, F3O9_29
    AT1G17950AT1G17950.1 Symbol: MYB52 | myb family transcription factor (MYB52), similar to myb-like protein GI:6979341 from (Oryza sativa) | chr1:6177610-6179282 FORWARD | Aliases: ATMYB52, BW52, F2H15.17, F2H15_17, MYB52
    AT1G18570AT1G18570.1 Symbol: MYB51 | myb family transcription factor (MYB51), contains PFAM profile: PF00249 | chr1:6389404-6391260 FORWARD | Aliases: BW51A, BW51B, F25I16.9, F25I16_9, MYB51
    AT1G18710AT1G18710.1 Symbol: None | myb family transcription factor (MYB47), contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:6450586-6453106 FORWARD | Aliases: F6A14.18, F6A14_18
    AT1G22640AT1G22640.1 Symbol: MYB3 | myb family transcription factor (MYB4), similar to myb-related protein GI:1020155 from (Arabidopsis thaliana) | chr1:8006186-8007417 FORWARD | Aliases: ATMYB3, T22J18.19, T22J18_19, TRANSCRIPTION FACTOR MYB3
    AT1G25340AT1G25340.1 AT1G25340.2 Symbol: MYB116 | similar to myb family transcription factor (MYB62) [Arabidopsis thaliana] (TAIR:At1g68320.1); similar to typical P-type R2R3 Myb protein [Sorghum bicolor] (GB:AAL84762.1); contains InterPro domain Myb DNA-binding domain (InterPro:IPR001005) | chr1:8885197-8886258 FORWARD | Aliases: F4F7.27, F4F7_27
    AT1G26780AT1G26780.1 Symbol: MYB117 | myb family transcription factor (MYB117), contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:9271020-9272115 FORWARD | Aliases: T24P13.16, T24P13_16
    AT1G34670AT1G34670.1 Symbol: None | myb family transcription factor, similar to myb-related protein mixta GI:485867 from (Antirrhinum majus) | chr1:12709106-12710401 FORWARD | Aliases: F21H2.9, F21H2_9
    AT1G35515AT1G35515.1 Symbol: HOS10/MYB8 | myb family transcription factor (MYB8), similar to DNA-binding protein GB:AAA98761 GI:1020155 from (Arabidopsis thaliana) | chr1:13077904-13080243 FORWARD | Aliases: HIGH RESPONSE TO OSMOTIC STRESS 10
    AT1G48000AT1G48000.1 Symbol: MYB112 | myb family transcription factor, similar to myb-related transcription factor (cpm10) GB:U33915 GI:1002795 from (Craterostigma plantagineum) | chr1:17707848-17710129 REVERSE | Aliases: T2J15.9, T2J15_9, TRANSCRIPTION FACTOR MYB112
    AT1G49010AT1G49010.1 Symbol: None | myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:18136313-18137593 FORWARD | Aliases: F27J15.20
    AT1G56160AT1G56160.1 Symbol: None | myb family transcription factor (MYB72), contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB72) mRNA, partial cds GI:3941501 | chr1:21026049-21027252 FORWARD | Aliases: F14G9.22
    AT1G56650AT1G56650.1 Symbol: PAP1 | myb family transcription factor (MYB75), contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB75) GI:3941507 | chr1:21237260-21238801 REVERSE | Aliases: F25P12.92, F25P12_92, MYB75, PRODUCTION OF ANTHOCYANIN PIGMENT 1
    AT1G57560AT1G57560.1 Symbol: None | myb family transcription factor (MYB50), similar to DNA-binding protein GI:19058 from (Hordeum vulgare) | chr1:21320493-21321729 FORWARD | Aliases: T8L23.3, T8L23_3
    AT1G63910AT1G63910.1 Symbol: ATMYB103 | myb family transcription factor (MYB103), contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:23723456-23725288 REVERSE | Aliases: MYB103, T12P18.7, T12P18_7, TRANSCRIPTION FACTOR MYB103
    AT1G66230AT1G66230.1 Symbol: MYB20 | myb family transcription factor (MYB20), similar to myb-related transcription factor GI:1430846 from (Lycopersicon esculentum); contains PFAM profile: Myb DNA binding domain PF00249 | chr1:24680817-24682078 FORWARD | Aliases: MYB20, T6J19.5, T6J19_5
    AT1G66370AT1G66370.1 Symbol: MYB113 | myb family transcription factor (MYB113), contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:24757297-24758267 FORWARD | Aliases: MYB113, T27F4.12, T27F4_12
    AT1G66380AT1G66380.1 Symbol: MYB114 | myb family transcription factor (MYB114), similar to myb-related protein An2 GI:7673090 from (Petunia x hybrida) | chr1:24761076-24762153 FORWARD | Aliases: MYB114, T27F4.13, T27F4_13
    AT1G66390AT1G66390.1 Symbol: PAP2 | myb family transcription factor, putative / production of anthocyanin pigment 2 protein (PAP2), contains Pfam profile: PF00249 myb-like DNA-binding domain; similar to GB:AAF66727 from (Petunia x hybrida) (Plant Cell 11 (8), 1433-1444 (1999)); identical to cDNA production of anthocyanin pigment 2 protein (PAP2) GI:11935172 | chr1:24767620-24769203 FORWARD | Aliases: MYB90, PRODUCTION OF ANTHOCYANIN PIGMENT 2, T27F4.14, T27F4_14
    AT1G68320AT1G68320.1 Symbol: MYB62 | myb family transcription factor (MYB62), similar to myb-related transcription factor (cpm7) GI:1002799 from (Craterostigma plantagineum); contains PFAM profile: myb DNA binding domain PF00249 | chr1:25607505-25608759 FORWARD | Aliases: BW62B, BW62C, T22E19.5, T22E19_5
    AT1G69560AT1G69560.1 Symbol: MYB105 | myb family transcription factor (MYB105), contains Pfam profile: PF00249: Myb-like DNA-binding domain | chr1:26161418-26162757 FORWARD | Aliases: F10D13.19, F10D13_19, MYB105
    AT1G73410AT1G73410.1 Symbol: MYB54 | myb family transcription factor (MYB54), identical to putative transcription factor (MYB54) GI:3941471 from (Arabidopsis thaliana) | chr1:27605293-27606978 FORWARD | Aliases: ATMYB54, BW54, MYB54, T9L24.38, T9L24_38
    AT1G74080AT1G74080.1 Symbol: MYB122 | myb family transcription factor (MYB122), contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:27859360-27861195 FORWARD | Aliases: F2P9.5, F2P9_5
    AT1G74430AT1G74430.1 Symbol: MYB95 | myb family transcription factor (MYB95), contains Pfam profile: PF00249 myb-like DNA-binding domain | chr1:27978842-27981095 FORWARD | Aliases: F1M20.11, F1M20_11, MYB95
    AT1G74650AT1G74650.1 Symbol: None | myb family transcription factor (cY13), similar to myb protein cY13 GI:928930 from (Arabidopsis thaliana); contains Pfam profile: PF00249 myb DNA-binding domain; identical to cDNA cY13 gene GI:928929 | chr1:28044852-28046656 FORWARD | Aliases: F1M20.33, F1M20_33
    Page: 1 2 3 4 5 list all

    MYB Family Introduction

    MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.

    In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.

    Stracke R, Werber M, Weisshaar B. Related Articles, Links
    The R2R3-MYB gene family in Arabidopsis thaliana.
    Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
    PMID: 11597504 [PubMed - indexed for MEDLINE]

    Stracke R, Werber M, Weisshaar B. Related Articles, Links
    The R2R3-MYB gene family in Arabidopsis thaliana.
    Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
    PMID: 11597504 [PubMed - indexed for MEDLINE]

    MYB Family Binding Site

    FamilySubfamily or DomainCis-element nameBinding siteReference
    MYB TBPtelomeric repeat(GGTTTAG)8 (GGTTTAG)5J. Biol. Chem., Vol. 276, Issue 19, 16511-16519, May 11, 2001 A Plant Gene Encoding a Myb-like Protein That Binds Telomeric GGTTTAG Repeats in Vitro
    MYB   GTAACGGTCTACJamin, N., Le Tilly, V., Zargarian, L., Bostad, A., Besancon-Yoshpe, I., Lirsac, P.-N., Gabrielsen, O. S., and Toma, F.(1996) Int. J. Quantum Chem. 59, 333-341.
    MYB   G[GT]T[AT]G[GT]TPNAS 93,14972-14977(1996)
    MYB  R01849 
    MYB  R08583 
    MYB  R09879 
    MYB  R09880 


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    last updated:2006-07-20